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structure nameASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE
(PROTEIN CRE RECOMBINASE)
referenceVan Duyne et al.
sourceEnterobacteria phage P1
experimentX-ray (resolution=2.20, R-factor=0.213)
structural superfamilyDNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
sequence familyPhage integrase family;
multimeric complexes1kbu_AB 1ma7_AB 1nzb_AB 1ouq_AB 1ouq_EF 1pvp_AB 1pvq_AB 1pvr_AB 1q3v_AB 1q3v_EF 1xo0_AB 2hof_AB 2hoi_GH 3c28_AB 3c29_AB 3mgv_AB 3mgv_CD 4crx_AB 5crx_AB 7rhx_AB 7rhz_AB
reference complex7rhx_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHTMSKTQQKRRKSRER

Estimated binding specificities ?

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# IC=12.608 IC/col=0.841 n_of_columns=15 specificity:   
A |  81   5  90  24  24  24  11   0   0   7  96   0  96   0   7
C |   5   5   0  24  24  24   5  96   0   5   0   0   0   0  79
G |   5   7   5  24  24  24   5   0  96   5   0   0   0  96   5
T |   5  79   1  24  24  24  75   0   0  79   0  96   0   0   5
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updated Mon Dec 18 09:56:00 2023