interface graph thumbnail
legend  pdf

structure nameCRE-LOXP SYNAPTIC STRUCTURE
referenceVan Duyne et al. 'To ? ? ?
sourceBacteriophage P1
experimentX-ray (resolution=2.20, R-factor=?)
structural superfamilyDNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
reference complex7rhx_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHTKMSKTQQRRKSRERNI/HTKMSKTQQRRKSRERNN

Estimated binding specificities ?

readout + contactlogo
# IC=26.703 IC/col=0.785 n_of_columns=34 specificity:   
A |  91   0  91  24  24  24   4   0   0   0  96   0  96   4  24  24  24  24  24  78   0   0  96   0  96   0   0  74  24  24  24   0  91   6
C |   1   0   0  24  24  24   6  96   0   0   0   0   0   4  24  24  24  24  24   9  96   0   0   0   0  96   0   4  24  24  24   5   0   4
G |   4   0   4  24  24  24   4   0  96   0   0   0   0  15  24  24  24  24  24   0   0   0   0   0   0   0  96   9  24  24  24   0   4   4
T |   0  96   1  24  24  24  82   0   0  96   0  96   0  73  24  24  24  24  24   9   0  96   0  96   0   0   0   9  24  24  24  91   1  82
scan!

home
updated Fri Dec 15 14:13:16 2023