1ouq_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE
reference	Meyer et al. 'Nucleic 31 5449 2003
source	Enterobacteria phage P1
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
reference complex	7rhx_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ouq_E interface=20,21,24,27,66,67,70,74,221,224,237,239,242,262,296,297, devrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwTNvnivmnyirnldsetgamvrlled > 1ouq_F interface=21,22,25,28,67,68,71,75,182,222,225,238,240,243,263,300,301, sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvNIvmnyirnldsetgamvrlled
interface signature	HTMSKTQQRKSRERTN/HTMSKTQQKRKSRERNI

Estimated binding specificities ?

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# IC=26.976 IC/col=0.817 n_of_columns=33

specificity:

A |  94   0  76  24  24  24   1   0   0   4  96   0  94   3  24   5   3  96  24  24  67   0  96   0  88   0   0  84  24  24  24   5  94
C |   0   1  12  24  24  24   3  96   0   1   0   0   0   0  24  89   7   0  24  24   7   0   0   0   4  96   0   6  24  24  24  12   0
G |   2   1   5  24  24  24   3   0  96   1   0   0   1  92  24   1   3   0  24  24  17   0   0   0   3   0  96   3  24  24  24   5   1
T |   0  94   3  24  24  24  89   0   0  90   0  96   1   1  24   1  83   0  24  24   5  96   0  96   1   0   0   3  24  24  24  74   1

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updated Fri Dec 15 09:59:16 2023