1ouq_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE
reference	Meyer et al. 'Nucleic 31 5449 2003
source	Enterobacteria phage P1
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
reference complex	7rhx_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ouq_A interface=31,32,35,38,77,78,81,85,232,235,248,250,253,273,308, nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled > 1ouq_B interface=21,22,24,25,28,67,68,71,75,182,222,224,225,238,240,243,263,298,301, sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled
interface signature	HTMSKTQQRKSRERN/HTKMSKTQQKRRKSRERNI

Estimated binding specificities ?

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# IC=23.737 IC/col=0.848 n_of_columns=28

specificity:

A |   2   0   0   0  96   0  96   5  24  24  24  76   2  24  71   0  96   0  96   0   0  82  24  24  24   0  90   0
C |   7  96   0   0   0   0   0   5  24  24  24   5  87  24   7   0   0   0   0  90   0   5  24  24  24   3   0   3
G |   2   0  96   3   0   0   0  79  24  24  24  13   2  24  16   0   0   0   0   2  96   2  24  24  24   0   2   0
T |  85   0   0  93   0  96   0   7  24  24  24   2   5  24   2  96   0  96   0   4   0   7  24  24  24  93   4  93

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updated Fri Dec 15 09:58:37 2023