4crx_AB : 3D-footprint complex

structure name	ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE
reference	Van Duyne et al.
source	Enterobacteria phage P1
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
reference complex	7rhx_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4crx_A interface=21,22,25,28,67,68,71,75,222,225,238,240,243,263, sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled > 4crx_B interface=21,22,25,28,67,68,71,75,182,222,224,225,238,240,243,263, sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled
interface signature	HTMSKTQQRKSRER/HTMSKTQQKRRKSRER

Estimated binding specificities ?

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# IC=26.555 IC/col=0.781 n_of_columns=34

specificity:

A |  92   1  24  24  24  24   6   0   0   0  96   0  96   0   7  24  24  24  24   7   0   0  96   1  93   0   0  84  24  24  24   0  84   5
C |   0   3  24  24  24  24   3  96   0   0   0   0   0   0  77  24  24  24  24   3  96   0   0   3   0  96   0   3  24  24  24   3   6   7
G |   4   0  24  24  24  24   3   0  96   0   0   0   0  96   7  24  24  24  24  79   0   0   0   0   3   0  96   6  24  24  24   1   3   3
T |   0  92  24  24  24  24  84   0   0  96   0  96   0   0   5  24  24  24  24   7   0  96   0  92   0   0   0   3  24  24  24  92   3  81

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updated Fri Dec 15 18:48:36 2023