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structure nameCRE RECOMBINASE-DNA TRANSITION STATE
(Recombinase cre)
referenceVan Duyne et al. 'Nucleic 38 5817 2010
sourceEnterobacteria phage P1
experimentX-ray (resolution=2.29, R-factor=0.194)
structural superfamilyDNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
sequence familyPhage integrase family;
multimeric complexes1kbu_AB 1ma7_AB 1nzb_AB 1ouq_AB 1ouq_EF 1pvp_AB 1pvq_AB 1pvr_AB 1q3v_AB 1q3v_EF 1xo0_AB 2hof_AB 2hoi_GH 3c28_AB 3c29_AB 3mgv_AB 3mgv_CD 4crx_AB 5crx_AB 7rhx_AB 7rhz_AB
reference complex7rhx_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHTKMSKTQQKRRKSRERN

Estimated binding specificities ?

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# IC=11.890 IC/col=0.849 n_of_columns=14 specificity:   
A |   0   0  96   0  96   0   0  72  24  24  24   8  87   8
C |  96   0   0   0   0  96   0   8  24  24  24   8   0  11
G |   0   0   0   0   0   0  96   8  24  24  24   8   8   8
T |   0  96   0  96   0   0   0   8  24  24  24  72   1  69
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updated Mon Dec 18 08:31:40 2023