3c29_G : 3D-footprint complex

structure name	CRE-LOXP SYNAPTIC STRUCTURE (Recombinase cre)
reference	Van Duyne et al. 'To ? ? ?
source	Bacteriophage P1
experiment	X-ray (resolution=2.20, R-factor=0.194)
structural superfamily	DNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
sequence family	Phage integrase family;
multimeric complexes	1kbu_AB 1ma7_AB 1nzb_AB 1ouq_AB 1ouq_EF 1pvp_AB 1pvq_AB 1pvr_AB 1q3v_AB 1q3v_EF 1xo0_AB 2hof_AB 2hoi_GH 3c28_AB 3c29_AB 3mgv_AB 3mgv_CD 4crx_AB 5crx_AB 7rhx_AB 7rhz_AB
reference complex	7rhx_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3c29_G interface=21,22,24,25,28,67,68,71,75,225,238,240,243,263,298,301, sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled
interface signature	HTKMSKTQQKSRERNI

Estimated binding specificities ?

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# IC=12.393 IC/col=0.885 n_of_columns=14

specificity:

A |  75   0  54  24  24  13   9   0   0   0  96   0  96   0
C |   0   6  16  24  24  16   6  96   0   0   0   0   0   0
G |  21   1  13  24  24   6   6   0  96   0   0   0   0  96
T |   0  89  13  24  24  61  75   0   0  96   0  96   0   0

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updated Mon Dec 18 07:42:51 2023