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structure nameCRYSTAL STRUCTURE OF THE PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE- LOXP SITE-SPECIFIC RECOMBINATION
(Recombinase cre)
referenceVan Duyne et al. J.Biol.Chem. 282 24004 2007
sourceEnterobacteria phage P1
experimentX-ray (resolution=2.40, R-factor=0.240)
structural superfamilyDNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
sequence familyPhage integrase family;
multimeric complexes1kbu_AB 1ma7_AB 1nzb_AB 1ouq_AB 1ouq_EF 1pvp_AB 1pvq_AB 1pvr_AB 1q3v_AB 1q3v_EF 1xo0_AB 2hof_AB 2hoi_GH 3c28_AB 3c29_AB 3mgv_AB 3mgv_CD 4crx_AB 5crx_AB 7rhx_AB 7rhz_AB
reference complex7rhx_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHTKMSKTQQRRKSRERI

Estimated binding specificities ?

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# IC=10.727 IC/col=0.825 n_of_columns=13 specificity:   
A |   0  96   0  96   0   0  64  24  24  24  10  85   0
C |   0   0   0   0  96   0  10  24  24  24  10   1  10
G |   0   0   0   0   0  96  10  24  24  24  12  10   0
T |  96   0  96   0   0   0  12  24  24  24  64   0  86
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updated Mon Dec 18 06:49:05 2023