| structure name | CRYSTAL STRUCTURE OF A PROTEOLYTICALLY DEFINED ZBETA DOMAIN OF HUMAN DAI (ZBP1, DLM-1) (Z-DNA-binding protein 1) |
| reference | Athanasiadis et al. 'To ? ? ? |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.60, R-factor=0.253) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| multimeric complexes | 4ka4_ADE |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------------------------------------YG---------------------------- +4ka4_B +--------------1 ----------------------HT----RTITYT-------------------------------- L +-14 +4kfc_B ! ! ----------------------KGTA----TA------RG-------------------------- L +-16 +--------------1xsd_A ! ! LAHAKARA------------------------------------------------------IAVA +--17 +--------------6dta_A ! ! ----------------------NT----TA----------------------RT------------ L ! +----------------5zux_A ! ------------SGQG----YCNC------------------------------------------ ! +2ve9_C ! +--3 ----------TT----------KATT--QTTG----LTRT----KA----------FT--YT---- L ! ! +2p7c_B ! +-8 ------------------------------------YG---------------------------- ! ! ! +4lb5_B ! ! ! +-2 ------------------TT--PTTC--STNT--------------------------RT------ L ! ! +--4 +4lln_I ! +---------10 ! ------------------DCSA--TA--TT--------RT------------------RA------ L ! ! ! +1z9c_A +-20 ! ! --------------------SANCTG--TTPT---------------------------------- L ! ! ! ! +-5hlg_E ! ! +---13 +-7 --------------------RGSTRT--STHG--------------------------RA------ L ! ! ! ! +-3zpl_B ! ! ! ! ------------------------------------YGRG-------------------------- ! ! ! ! +---4wcg_B ! ! ! +--------11 ----------------STQTPTPG--TTRG--------------------HT-------------- L ! ! ! +---5xxp_A ! ! +-18 ------------------------------------YG---------------------------- ! ! ! ! +2heo_D ! ! ! ! +-5 ----------------------------NAST--RGHT--ST------------------------ L +-21 ! ! ! +-6 +6nce_A ! ! ! ! ! ! ! ----------------------------NA----RAHT--STLT---------------------- L ! ! ! ! ! +-----------9 +-2a07_K ! ! +-19 ! ! ! ------------------------------------HT--ST------------------------ L ! ! ! +--15 +--6akp_C ! ! ! ! ------KAFA------------------------------------YANAKTFGMC---------- ! ! ! +--------------3aaf_B -22 ! ! ------------------STKTPTTT--FT--------------------------RA-------- L ! ! ! +-----------4aso_F ! ! +------12 --------------------RT-------------------------------------------- L ! ! +-----------5fmf_V ! ! ------------RG----STRGMCTT--RT------------------------------------ L ! +---------------------4u0y_B ! ----------------------NTVC--ECSTYT--STYC----------RA-------------- L +-----------------------5ed4_A |
home
updated Tue Dec 19 09:03:13 2023