| structure name | XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA) (DNA TRANSLOCASE FTSK) |
| reference | Sherratt et al. Mol.Cell 31 498 2008 |
| source | PSEUDOMONAS AERUGINOSA |
| experiment | X-ray (resolution=1.90, R-factor=0.199) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Ftsk gamma domain; |
| multimeric complexes | 2ve9_AF 2ve9_BC 2ve9_DE |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: KOPS | ||
| GGGNAGGG | PubMed | 2ve9_C(2.03e-03), 2ve9_BC(1.79e-03), 2ve9_DE(1.79e-03) |
Dendrogram of similar interfaces ?
matrix format--LAHAKARA------------------------------------------------IAVA +---------------------6dta_A +-----10 ------------YAKTPTPG----YTRG---------------------------------- L ! +---------------------4mtd_D ! ------------ET--RGTCTG--STRG--------------------------KT------ L ! +6q2b_B ! +--------------1 ------------NGLTKTPTST--TT--------RT------------------RT------ L ! +---------7 +7el3_B ! ! ! --------------TT--PTTC--STNT--------------------------RT------ L ! ! +--------------4lln_I ! +-13 --------------QTPTPG--TTRG--------------------------HT-------- L ! ! ! +----------5xxp_A ! ! +-------------4 --------------------------RC----YG--------KT------------------ ! ! ! +---2acj_B +-17 ! +------3 --------------------QTNAST--RGHT----ST--------RT-------------- L ! ! ! +---2hdc_A ! ! ! --------------------------------YGRG-------------------------- ! ! ! +--4wcg_A ! ! +-15 +-------2 ----------EGRGSARGMCTT--RT------------------------------------ L ! ! ! ! +---------5 +--4wwc_B ! ! ! ! ! ! ----------ETNTSCRGHC----RT----------------------QA------------ L ! ! ! ! +--9 +----------5d4s_B ! ! ! ! ! ! ----------RC-------------------------------------------------- ! ! ! ! +-12 +--------------------7cow_T ! ! ! ! ! ! --------------SGRGPT----SGRG---------------------------------- L +-18 ! ! ! ! +-----------------------7bhy_A ! ! +-16 +-14 --------------NTHG--RT--YTPT----------------------------RT---- L ! ! ! ! +----------6qil_A ! ! ! ! +-----------6 --------------------------NAST--HT----STLT-------------------- L ! ! ! +-11 +----------7cby_C ! ! ! ! ----------------------VT----ST--------------------WT---------- L ! ! ! +----------------------6lxn_A -19 ! ! ----------RA--ST--ECTT--RAKA--------------------HT------------ L ! ! ! +-----------------7oz3_B ! ! +----------8 ------------------TTHT----KG--------------------RC------------ L ! ! +-----------------7b0c_A ! ! --------------STRGQTQA--ST------------------HG--------KT------ L ! +-----------------------------7t8k_B ! SG------------------------------------------------------------ L +-----------------------------5n8r_B |
home
updated Tue Dec 19 06:58:57 2023