4aso_F : 3D-footprint complex

structure name	TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS (TUBR FROM BACILLUS THURINGIENSIS PBTOXIS)
reference	Aylett et al. Proc.Natl.Acad.Sci.USA 109 16522 2012
source	BACILLUS THURINGIENSIS
experiment	X-ray (resolution=7.00, R-factor=0.346)
structural superfamily	"Winged helix" DNA-binding domain;
multimeric complexes	4aso_ABC 4aso_EFG 4aso_HL 4aso_IJK 4aso_MNOP 4ass_EFGHI
redundant complexes	4ass_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4aso_F interface=48,49,50,51,53,72, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka
interface signature	SKPTFR

Estimated binding specificities ?

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# IC=3.520 IC/col=0.880 n_of_columns=4

specificity:

A |   0   0  38  76
C |   0   0  20   0
G |   0   0  19  19
T |  96  96  19   1

scan!

Dendrogram of similar interfaces ?

matrix format

  
  ------STSTQAQGSTSART----------KT--   L           +-------------------------5trd_B    
                                               +---2 
  --------DCLT--AGTTRG----RG------RA   L       !   !       +-----------------5h3r_A    
                                             +-3   +-------1 
  --------ST----TC--QG----RG--------         ! !           +-----------------7b24_C    
                                           +-4 ! 
  ----------------NASTRGHT--STLT--KA   L   ! ! +-----------------------------2c6y_A    
                                         --5 ! 
  --------ITRGECSCSGKG--------------   L   ! +-----------------------------5i2d_R    
                                           ! 
  HAKARA----------------------------       +-----------------------------6dta_A

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updated Tue Dec 19 08:35:56 2023