| structure name | X-RAY STRUCTURE OF ETS DOMAIN OF ERGP55 IN COMPLEX WITH E74DNA (Transcriptional regulator ERG) |
| reference | Gangwar et al. 'Acta 74 656 2018 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.77, R-factor=0.208) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Etsdomain; |
| multimeric complexes | 5jvt_AD 6vg8_AD 6vgd_AD 6vge_AD 6vgg_AD |
| reference complex | 4iri_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | DKRRY |
Estimated binding specificities ?
| contact |  |
A | 13 0 0 0 13 C | 13 0 96 96 13 G | 13 0 0 0 57 T | 57 96 0 0 13scan! |
Dendrogram of similar interfaces ?
matrix format--------DCKT--RG----RGYA---------- L +5ybd_A +-------7 --------DCKT--RG----RGYA----KA---- L ! ! +5jvt_A ! +-5 --------DCKT--RGAT--RCYA---------- L +-11 +5e8i_D ! ! ----------KT--RG----RGYA---------- L ! ! +4l18_B ! +--------4 ----------KT--RG----RGYA---------- L ! +4lg0_B +-15 --------DCKT--RG----RGYA---------- L ! ! +-3zp5_A ! ! +-8 ----------KT--RG----RGYA---------- L ! ! +----9 +-3wts_C ! ! ! ! --------EC----RG----RGYC---------- L ! ! ! +---2stw_A +-17 +-12 --------ECKT--RGAT--RGHT------RA-- L ! ! ! +4mhg_A ! ! ! +-1 ----------KT--RGAT--RGYA---------- L ! ! +--------3 +1bc8_C ! ! ! ----------KT--RG----RGYA---------- L +-18 ! +1hbx_G ! ! ! --------DCKT--RGST--RGYA---------- L ! ! +------------4bnc_A ! ! ----------KT--RGAT--RGYA---------- L +-19 ! +---------4iri_A ! ! +---13 ----------------NT--CT--NGST------ L ! ! +---------1if1_B ! ! --------DCKT--RGST--RGYC---------- L +-20 ! +-----------4uno_A ! ! +--16 RT------------------------------YG L ! ! +-----------5vfx_A ! ! ----------ST--------RTQT--KG------ +-21 ! +5d5w_B ! ! +-----------------6 ----------ST--------RTQT---------- L ! ! +5d8k_B ! ! ----------KT--RG----RGYT---------- L +-22 +--------------------4bqa_A ! ! ------------------RAHT--STLT------ L ! ! +-----2a07_J ! ! +---10 --LTNTHG--RTYTPT----------------RT L ! ! ! +-----6qil_A -23 +----------14 ------------------RGHT--ST-------- L ! ! +6akp_C ! +----------2 ------------NAST--RGHT--STFT------ L ! +1vtn_C ! ------------RGYC------------------ +-------------------------5zmn_A |
home
updated Mon Dec 18 14:07:28 2023