| structure name | STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS (PROTEIN SAP-1 ETS DOMAIN) |
| reference | Marmorstein et al. Mol.Cell 2 201 1998 |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.93, R-factor=0.220) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Etsdomain; |
| multimeric complexes | 1k6o_ABC |
| redundant complexes |  1bc7_C
1k6o_C
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | DKRARY |
Estimated binding specificities ?
| readout + contact |  |
A | 19 0 0 0 19 C | 19 0 96 96 0 G | 20 0 0 0 76 T | 38 96 0 0 1scan! |
Dendrogram of similar interfaces ?
matrix format--------DCKT--RGST--RGYA------ L +----------4bnc_A +--------------3 ----------------NT--CT--NGST-- L ! +----------1if1_B ! --------DCKT--RG----RGYA------ L ! +1dux_F ! +--------------1 ----------KT--RGAT--RGYA------ L ! ! +4iri_A +---8 +-4 --------ECKT--RGAT--RGNT------ L ! ! ! ! +----1pue_E ! ! +--5 +----------2 ----------STVT------RGQTNT--MT L ! ! ! ! +----5d5v_B ! ! +--6 ! ----------ST--------RTQT--KG-- +-9 ! ! ! +-----------------5d5w_B ! ! +-7 ! ------------RTNT--RGSTAT--RT-- ! ! ! +--------------------1t2k_B ! ! ! ----KTHG---------------------- -10 ! +-----------------------5hdn_C ! ! RGKG-------------------------- L ! +-----------------------------6lui_A ! --------------ST--RGHT--ST---- L +-----------------------------3g73_A |
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updated Tue Dec 19 05:26:28 2023