6gtc_A : 3D-footprint complex

structure name	TRANSITION STATE STRUCTURE OF CPF1(CAS12A) I1 CONFORMATION (CRISPR-ASSOCIATED ENDONUCLEASE CAS12A)
source	FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112
experiment	NMR
redundant complexes	5mga_A 5nfv_A 6gtd_A 6gte_A 6gtf_A 6gtg_A 6i1k_A 6i1l_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6gtc_A interface=180,184,185,188,598,648,651,652,653,656,662,736,739,868,880, msiyqefvnkyslsktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwttyfKgfhENrkNvyssndiptsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdtdkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepdntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsiDefYrevenqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklngeaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcPitinfkssganKfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnfgfkrgrfkvekqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrn
interface signature	KENNKPNKMKKDYPK

Estimated binding specificities ?

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# IC=8.936 IC/col=0.993 n_of_columns=9

specificity:

A |   0   0  96   8  96   0  56  96  16
C |   0   0   0   8   0   0  16   0  16
G |   0   0   0  72   0  96   8   0  48
T |  96  96   0   8   0   0  16   0  16

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updated Tue Dec 19 12:59:46 2023