6gte_A : 3D-footprint complex

structure name	TRANSIENT STATE STRUCTURE OF CRISPR-CPF1 (CAS12A) I3 CONFORMATION
experiment	NMR
reference complex	6gtc_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6gte_A interface=12,175,182,183,195,604,607,654,657,658,659,662,668,745,749,816,818,885, iyqefvnkyslSktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfkgfhENrknvyssndipTsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdtekleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknldnpskkeqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepDntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsidefYrevEnqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklNgEaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcpitinfkssgaNkfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrn
interface signature	STENTKDPNKMKKYENEN

Estimated binding specificities ?

contact

# IC=8.247 IC/col=0.916 n_of_columns=9

specificity:

A |  12   0   0   0   0  84  96  24  12
C |  12  96   0  96   0   0   0  24  12
G |  12   0   0   0   0   0   0  24  60
T |  60   0  96   0  96  12   0  24  12

scan!

home
updated Mon Dec 18 15:19:29 2023