6gtf_A : 3D-footprint complex

structure name	TRANSIENT STATE STRUCTURE OF CRISPR-CPF1 (CAS12A) I5 CONFORMATION (CRISPR-ASSOCIATED ENDONUCLEASE CAS12A)
source	FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112
experiment	NMR
reference complex	6gtc_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6gtf_A interface=12,175,183,194,195,606,656,659,660,661,664,670,743,744,747,751,818,887, iyqefvnkyslSktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfkgfheNrknvyssndiPTsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdteskkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknldnpskkeqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepdntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsIDefYrevEnqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklNgeaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcpitinfkssgaNkfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsdknhnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrnn
interface signature	STNPTKPNKMKKIDYENN

Estimated binding specificities ?

contact

# IC=8.745 IC/col=0.972 n_of_columns=9

specificity:

A |   6   6   0   6   0  96  96   6   6
C |   6  78   0  78   0   0   0  78   6
G |   6   6   0   6   0   0   0   6  78
T |  78   6  96   6  96   0   0   6   6

scan!

home
updated Mon Dec 18 15:19:54 2023