interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F25 CONTAINING T2A3 SEQUENCE AT CENTER
(DNA-binding protein fis)
referenceJohnson et al. 'Genes 24 814 2010
sourceEscherichia coli
experimentX-ray (resolution=3.10, R-factor=0.245)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
multimeric complexes3iv5_AB 3jr9_AB 3jra_AB 3jrb_AB 3jrc_AB 3jrd_AB 3jre_AB 3jrf_AB 3jrg_AB 3jrh_AB 3jri_AB 4ihv_AB 4ihw_AB 4ihx_AB 4ihy_AB 5ds9_AB 5dtd_AB 5e3l_AB 5e3m_AB 5e3n_AB 5e3o_AB 6p0s_ABE 6p0t_ABE 6p0u_ABEF
reference complex5ds9_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

contactlogo
# IC=3.673 IC/col=0.612 n_of_columns=6 specificity:   
A |   7   0   7  24   7  75
C |   7   0  73  24  75   7
G |   9  96   9  24   7   7
T |  73   0   7  24   7   7
scan!

home
updated Mon Dec 18 08:10:25 2023