5dtd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
reference	Hancock et al. 'Plos 11 e0150189 2016
source	Escherichia coli
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5dtd_A interface=77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn > 5dtd_B interface=84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn
interface signature	NRTR/NRR

Estimated binding specificities ?

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# IC=8.179 IC/col=0.481 n_of_columns=17

specificity:

A |   1   0   0  24  24  16  24  24  24  24  24   0   6  24  16   0   4
C |  87   0   0  24  24   0  24  24  24  24  24   0  70  24  20  96  16
G |   4  96   0  24  24  62  24  24  24  24  24   0  20  24  33   0  76
T |   4   0  96  24  24  18  24  24  24  24  24  96   0  24  27   0   0

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updated Sat Dec 16 00:46:00 2023