4ihw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP INOSINE SUBSTITUTED DNA F28- DI (AAATTTGTTTGAICITTGAGCAAATTT)
reference	Hancock et al. 'Nucleic 41 6750 2013
source	Escherichia coli
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ihw_A interface=68,77,78,80,82,83, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRKklkkygmn > 4ihw_B interface=75,84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn
interface signature	TNRTRK/TNRR

Estimated binding specificities ?

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# IC=6.842 IC/col=0.402 n_of_columns=17

specificity:

A |   2   0  24  24   2  90  24  24  24  24  24  22  24  24  39   0  94
C |   0   0  24  24  42   2  24  24  24  24  24  42  24  24  11  96   0
G |   1  96  24  24   2   2  24  24  24  24  24  16  24  24  27   0   0
T |  93   0  24  24  50   2  24  24  24  24  24  16  24  24  19   0   2

scan!

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updated Fri Dec 15 19:23:28 2023