3jrh_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F21
reference	Johnson et al. 'Genes 24 814 2010
source	Escherichia coli
experiment	X-ray (resolution=2.88, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3jrh_A interface=68,77,78,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn > 3jrh_B interface=75,84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn
interface signature	TNRR/TNRR

Estimated binding specificities ?

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# IC=8.469 IC/col=0.498 n_of_columns=17

specificity:

A |   2   0   9  24  84  11  24  24  24  24  24  11  21  24   9   0  91
C |   1   0   7  24   1  74  24  24  24  24  24  14   0  24  18  96   2
G |   0  96   3  24   2   7  24  24  24  24  24  58  74  24  58   0   1
T |  93   0  77  24   9   4  24  24  24  24  24  13   1  24  11   0   2

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updated Fri Dec 15 15:05:51 2023