6p0u_ABEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX " FX(1-2)-2XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS
reference	Hancock et al. 'Nucleic 47 8874 2019
source	ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA
experiment	X-ray (resolution=3.30, R-factor=?)
structural superfamily	Putative DNA-binding domain;Homeodomain-like;
reference complex	1rh6_B 5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6p0u_A interface=71,72,76, sdvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn > 6p0u_B interface=61,70,71,75, dvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn > 6p0u_E interface=17,19,20,22,23,26,39, myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl > 6p0u_F interface=23,26,39, myltlqewnarqrrprsletvrRwvResrifpppvkdgReylfhesavkvd
interface signature	NRR/TNRR/SETRRRR/RRR

Estimated binding specificities ?

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# IC=12.652 IC/col=0.602 n_of_columns=21

specificity:

A |   0   1  21   3   0   0  24  24  24  24  78  65   3  90   0  96  24  24  24  24   0
C |   0   0  53   1   0   2  24  24  24  24   5  21  83   1  96   0  24  24  24  24   0
G |  96  71   9  81  96   0  24  24  24  24   7   9   1   4   0   0  24  24  24  24   4
T |   0  24  13  11   0  94  24  24  24  24   6   1   9   1   0   0  24  24  24  24  92

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updated Sat Dec 16 15:35:48 2023