| structure name | STRUCTURE OF THE WILMS TUMOR SUPPRESSOR PROTEIN ZINC FINGER DOMAIN BOUND TO DNA (Wilms tumor 1) |
| reference | Debler et al. J.Mol.Biol. 372 1227 2007 |
| source | Homo sapiens |
| experiment | X-ray (resolution=3.15, R-factor=0.236) |
| structural superfamily | C2H2 and C2HC zinc fingers; |
| sequence family | Zinc finger, C2H2 type; |
| redundant complexes | 2jp9 2jpa |
| reference complex | 2jpa_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RDRRDHRDER |
Estimated binding specificities ?
| readout + contact |  |
A | 0 1 0 0 0 0 0 0 0 19 C | 0 76 0 0 0 0 0 96 0 20 G | 96 0 96 96 96 96 96 0 96 19 T | 0 19 0 0 0 0 0 0 0 38scan! |
Dendrogram of similar interfaces ?
matrix formatACYCPCPCYCRG--DA--RG--RG--DCHG----------RG--DCECRG L +-------2prt_A +-----------5 ----------QG--RGHTMG--QG----LGLC------TTRG-------- L ! +-------5yel_A ! ----------RGSTDAHARG--RGSTDCHG----TT----RG--DAEGRG L ! +5kl3_A ! +-------2 --------------HCHGRG--TA--ACNA----KGRG------------ L --8 +--4 +1tf6_A ! ! ! ----------LT--ETYC----NTYGQG---------------------- L ! ! +-------4f6m_A ! +---6 ----------QA--TTNA--STQAQTATST--NTAT----TTLAHGTCRG L ! ! ! +1g2f_F ! ! ! +---1 ----------QA--ATHG----RG--DCNA----TT----RGRTDAAT-- L +----7 +------3 +2i13_A ! ! ------------TCYCKARG--QA----TC----------RA--SCDCVT L ! +---5yeg_A ! ----------RG--DGECRG--RGSGDCHA-------------------- L +--------------2wbs_A |
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updated Mon Dec 18 07:09:56 2023