| structure name | WILMS TUMOR PROTEIN (WT1) ZNF2-4 Q369H IN COMPLEX WITH DNA (Wilms tumor protein) |
| reference | Hashimoto et al. 'Nucleic 44 10165 2016 |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.45, R-factor=0.163) |
| structural superfamily | beta-beta-alpha zinc fingers; |
| sequence family | Zinc finger, C2H2 type; |
| redundant complexes | 4r2e_A
4r2p_A
4r2q_A
4r2r_A
4r2s_A
 5kl2_A
5kl4_D
5kl5_A
5kl6_A
5kl7_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RHRRDHRDR |
Estimated binding specificities ?
| readout + contact |  |
A | 13 0 1 0 0 0 82 0 0 0 C | 54 96 13 96 96 83 0 96 0 96 G | 16 0 0 0 0 0 14 0 96 0 T | 13 0 82 0 0 13 0 0 0 0scan! |
Dendrogram of similar interfaces ?
matrix format--KG--WTKA--------HCHGRG--TAACNA--KGRG L +1tf6_A +-----------1 NGKT--WTKG--------HTHGRGTGTTACNA--KGRG L +---------------3 +1tf3_A ! ! ------------RGST--YGYC----QCTGSTRGYT-- ! +-----------4is1_C ! --CT--STQTLTITST--STHTRG--RG--EA--RA-- L ! +-------------------5v3j_F ! ! --VT----NARG------ETTG----YGST-------- --8 +----5 +--6e94_A ! ! ! +------------2 --DG--YCKGRG--QA----TC----RASCDC--VT-- L ! ! +---4 +--5k5h_A ! +-6 ! --------------QA----TCRG--RGYCRT------ L ! ! ! +---------------7txc_E +-7 ! --NT--STNAVT--QTSTSGKGRG-------------- L ! +------------------------6u9q_A ! QT--AG--KGRG--RG--DCKG---------------- L +-------------------------7n5w_A |
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updated Tue Dec 19 10:49:56 2023