| structure name | CRYSTAL STRUCTURE OF THE ARGININE REPRESSOR PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH THE DNA OPERATOR (ARGININE REPRESSOR) |
| reference | TB Structural Genomics Consortium (TBSGC) |
| source | MYCOBACTERIUM TUBERCULOSIS |
| experiment | X-ray (resolution=2.50, R-factor=0.227) |
| structural superfamily | C-terminal domain of arginine repressor;"Winged helix" DNA-binding domain; |
| sequence family | Arginine repressor, DNA binding domai; Arginine repressor, Cterminal domain; |
| redundant complexes | 3fhz |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | TQASR |
Estimated binding specificities ?
| contact |  |
A | 13 0 16 96 0 96 C | 13 0 54 0 0 0 G | 13 96 13 0 0 0 T | 57 0 13 0 96 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ArgR | ||
| CATGAATAAAAATG | PubMed | 3ere_D(1.76e-03), 3fhz_AD(4.07e-04), 3fhz_BF(8.67e-05), ... (total=4) |
| GTTTGC | PubMed | 3ere_D(6.52e-03) |
Dendrogram of similar interfaces ?
matrix format--------TGQAAT----SARG---------- L +-----------------3ere_D ! ------------NAST--RGHT--ST------ L +------6 +----------3g73_A ! ! ! MG------TGQAAT----SARG---------- L ! ! ! +--2p5l_D ! +------5 +---3 --TT--------QTTG----LTRT--KAFTYT L ! ! ! ! +-2p7c_B ! ! ! +-2 ------------RTTALT----RG-------- L --7 +---4 ! +1sax_A ! ! +-1 --------TA----TA------RG-------- L ! ! +1xsd_A ! ! ----SGQG------------------------ ! +------2ve9_C ! --DT------RTRGTT----KT---------- L +------------------------2o8k_A |
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updated Mon Dec 18 07:53:33 2023