| structure name | STRUCTURE OF THE FOXM1 DNA BINDING (Forkhead box protein M1) |
| reference | Littler et al. 'Nucleic ? ? 2010 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.21, R-factor=0.206) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Fork head domain; |
| multimeric complexes | 3g73_AB 7fj2_AB 7fj2_EF |
| redundant complexes |  7fj2_F
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NSRHS |
Estimated binding specificities ?
| readout + contact |  |
A | 0 88 96 72 16 64 C | 0 0 0 8 64 8 G | 0 8 0 8 8 8 T | 96 0 0 8 8 16scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: FOXM1 | ||
| TAAACA | PubMed | 3g73_A(5.71e-11), 3g73_AB(2.21e-07) |
Dendrogram of similar interfaces ?
matrix format----------------------NAST--RGHT----STLT---------------- L +--------7cby_C +-------------------5 ------------------------------------------------------NG ! +--------7k63_U ! ----------------------NA----RAHT----STLT---------------- L ! +--2a07_J ! +--------------------3 ----------------------NAST--RGHTNT--STLT---------------- L ! ! ! +7fj2_B ! +-12 +--1 ------------------QTNAST--RGHTNT--STLA------------------ L +-14 ! ! +2hdc_A ! ! ! ! ------------------------NT--RGCT----NGST---------------- L ! ! ! +-----------------------1if1_B ! ! ! ----------------------NAST--RTHT----STLT---------------- L ! ! ! +--------4lg0_A ! ! ! +-6 ----------LTNTHG--RT--YTPT------------------------------ L ! ! ! +-7 +--------6qil_A ! +-13 ! ! ----KAFA------------------------------------YANAKTFGMC-- ! ! +----8 +----------3aaf_B ! ! ! ! RT--------LT----TA----YTRG------------------------QA---- ! ! +---10 +------------2efw_A +-15 ! ! ! ----------------------NAST--RTHT----ST------------------ L ! ! ! ! ! +------3l2c_A ! ! ! ! +----------4 --------RC--------------------------------------------SG ! ! +--11 +------7cow_T ! ! ! --------TT------KATT--QTTG----LTRT------KA--------FT--YT L ! ! ! +2p7c_B +-16 ! ! +----------------2 ----------------KGTA----TA------RG---------------------- L ! ! ! +-----9 +1xsd_A ! ! ! ! --RC---------------------------------------------------- ! ! ! +----------------6l9z_S -17 ! ! ------------------------RC----YG----------KT------------ ! ! +----------------------------2acj_B ! ! ----------------------NAST--RTHT----ST------------------ ! +-----------------------------3co7_C ! --------------SGAAEC--KG----RG-------------------------- L +-----------------------------7rva_C |
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updated Tue Dec 19 07:20:10 2023