6fb6_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF MANGANESE (I-CREI MONOMER B)
reference	Molina et al. 'Sci 8 10286 2018
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=2.60, R-factor=0.198)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6fb0_AB 6fb1_AB 6fb2_AB 6fb5_AB 6fb6_AB
reference complex	6fb0_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb6_B interface=23,25,27,29,31,37,43,45,67,69,72,76,138,139, ntkynkefllylagfvdgdgsiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl
interface signature	IQKNSKKTYSVYKT

Estimated binding specificities ?

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# IC=8.431 IC/col=0.937 n_of_columns=9

specificity:

A |   0  54   0  96  96   0  24   0  13
C |   0  16  96   0   0   0  24  96  13
G |  96  13   0   0   0  96  24   0  16
T |   0  13   0   0   0   0  24   0  54

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updated Mon Dec 18 15:07:25 2023