6fb2_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MANGANESE
reference	Molina et al. 'Sci 8 10286 2018
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=2.95, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	6fb0_A 6fb0_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb2_A interface=23,25,27,29,31,37,39,43,45,65,67,69,72,74,76,139, ntkynkefllylagfvdsdgsiIaQiKpNqSvkfkhRlQltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds > 6fb2_B interface=21,23,25,27,31,37,43,45,67,69,72,76,138,139, ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl
interface signature	IQKNSRQDTYASVKRT/SIQKSKKTYSVYKT

Estimated binding specificities ?

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# IC=20.578 IC/col=0.980 n_of_columns=21

specificity:

A |  96   6  24   0   0   0   0   0   0  24  24  14  96   0   0  96   0  12   0  96   8
C |   0   8  24  96   0   0  96   0  96  24  24  64   0   0   0   0   0  12  96   0   6
G |   0  76  24   0   0   0   0   0   0  24  24   6   0  96  96   0  96  15   0   0  76
T |   0   6  24   0  96  96   0  96   0  24  24  12   0   0   0   0   0  57   0   0   6

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updated Sat Dec 16 10:23:21 2023