6fb1_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MAGNESIUM
reference	Molina et al. 'Sci 8 10286 2018
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=3.02, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	6fb0_A 6fb0_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb1_A interface=23,25,27,29,31,37,43,45,65,67,69,72,74,76,139, ntkynkefllylagfvdsdgsiIaQiKpNqSvkfkhRlqltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds > 6fb1_B interface=21,23,25,27,29,31,37,43,45,67,69,72,76,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl
interface signature	IQKNSRDTYASVKRT/SIQKNSKKTYSVYKT

Estimated binding specificities ?

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# IC=20.521 IC/col=0.977 n_of_columns=21

specificity:

A |  96   0  24   0   0   0   0   0   0  24  24  12  96   0   0  96   0  12   6  78   6
C |   0   6  24  96   0   0  96   0  90  24  24  60   0   0   0   0   0   6  90   6   0
G |   0  90  24   0   0   0   0   0   6  24  24  12   0  96  96   0  96  12   0   6  90
T |   0   0  24   0  96  96   0  96   0  24  24  12   0   0   0   0   0  66   0   6   0

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updated Sat Dec 16 10:23:07 2023