6fb1_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MAGNESIUM (DNA ENDONUCLEASE I-CREI)
reference	Molina et al. 'Sci 8 10286 2018
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=3.02, R-factor=0.210)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6fb0_AB 6fb1_AB 6fb2_AB 6fb5_AB 6fb6_AB
reference complex	6fb0_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb1_B interface=21,23,25,27,29,31,37,43,45,67,69,72,76,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl
interface signature	SIQKNSKKTYSVYKT

Estimated binding specificities ?

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# IC=7.578 IC/col=0.842 n_of_columns=9

specificity:

A |  75   6  24   0   0   0   0   6   9
C |   9   6  24  96   6   0  96   9  75
G |   6  78  24   0   1   0   0   6   6
T |   6   6  24   0  89  96   0  75   6

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updated Mon Dec 18 15:06:54 2023