interface graph thumbnail
legend  pdf

structure nameRADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 44.6 MGY
(Regulatory protein)
referenceMcGeehan et al.
sourceEnterobacter sp. RFL1396
experimentX-ray (resolution=2.80, R-factor=0.266)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
multimeric complexes3clc_ABCD 3s8q_AB 3ufd_AB 4ivz_AF 4iwr_AB 4iwr_EF 4x4b_ABCD 4x4c_ABCD 4x4d_ABCD 4x4e_ABCD 4x4f_ABCD 4x4g_ABCD 4x4h_ABCD 4x4i_ABCD
reference complex3s8q_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQDRTYSRR

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |   0  54   0  54
C |  96  16  96  13
G |   0  13   0  13
T |   0  13   0  16
scan!

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updated Mon Dec 18 11:31:34 2023