4x4e_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 14.4 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3s8q_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4e_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4e_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4e_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4e_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

readout + contact

# IC=22.911 IC/col=0.694 n_of_columns=33

specificity:

A |   0   0   0  13  96   0   0  24  24  24  24  24   5   1  24   2   1   0   1   1  24  92  24  24  24  24  19   1   2  24  94   0  96
C |   0   0   0   5   0  96   7  24  24  24  24  24   9  90  24   0  72   9   1   1  24   1  24  24  24  24  11   1  94  24   1  96   0
G |   0  96   1  67   0   0   1  24  24  24  24  24  17   4  24  94   0  87   1  92  24   0  24  24  24  24  65   1   0  24   1   0   0
T |  96   0  95  11   0   0  88  24  24  24  24  24  65   1  24   0  23   0  93   2  24   3  24  24  24  24   1  93   0  24   0   0   0

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updated Fri Dec 15 21:11:28 2023