4x4i_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 44.6 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3s8q_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4i_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4i_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4i_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4i_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

readout + contact

# IC=23.066 IC/col=0.699 n_of_columns=33

specificity:

A |   0   0   2   9  96   0   1  24  24  24  24  24   7   1  24   0   0   0   0   1  24  94  24  24  24  24  21   1   0  24  90   0  96
C |   0   0   1   1   0  96   1  24  24  24  24  24  13  95  24   0  72  12   1   1  24   0  24  24  24  24  11   1  96  24   1  96   0
G |   0  96   1  71   0   0   4  24  24  24  24  24  13   0  24  96   0  84   1  92  24   1  24  24  24  24  59   1   0  24   1   0   0
T |  96   0  92  15   0   0  90  24  24  24  24  24  63   0  24   0  24   0  94   2  24   1  24  24  24  24   5  93   0  24   4   0   0

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updated Fri Dec 15 21:13:01 2023