4x4g_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 26.8 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3s8q_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4g_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4g_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4g_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4g_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

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# IC=22.773 IC/col=0.690 n_of_columns=33

specificity:

A |   0   0   0   9  96   0   0  24  24  24  24  24  13   0  24   1   0   0   0   0  24  86  24  24  24  24   9   0   0  24  94   0  96
C |   0   0   0  11   0  96  11  24  24  24  24  24   7  94  24   1  72  15   0   0  24   1  24  24  24  24   7   7  96  24   0  96   0
G |   0  96   0  63   0   0   1  24  24  24  24  24  32   0  24  94   0  80   0  96  24   0  24  24  24  24  71   0   0  24   1   0   0
T |  96   0  96  13   0   0  84  24  24  24  24  24  44   2  24   0  24   1  96   0  24   9  24  24  24  24   9  89   0  24   1   0   0

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updated Fri Dec 15 21:12:16 2023