interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB
(NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT)
referenceChen-Park et al. J.Biol.Chem. 277 24694 2002
sourceMUS MUSCULUS
experimentX-ray (resolution=2.75, R-factor=?)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
multimeric complexes1le5_AB 1le5_EF 1le9_AB 1le9_EF 1lei_AB 1ram_AB 1vkx_AB 2i9t_AB 2ram_AB 3gut_ABD 3gut_CF 3gut_EGH 5u01_ABCD
reference complex2ram_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYCEAR

Estimated binding specificities ?

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# IC=3.562 IC/col=0.890 n_of_columns=4 specificity:   
A |  19   0   0   0
C |  19   0  96  76
G |  19   0   0   0
T |  39  96   0  20
scan!

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updated Mon Dec 18 05:18:54 2023