Estimated binding specificities ?

structure nameTFAM IN COMPLEX WITH SITE-Y
(Transcription factor A, mitochondrial)
referenceFernandez-Millan et al.
sourceHomo sapiens
experimentX-ray (resolution=3.05, R-factor=0.192)
structural superfamilyHMG-box;
sequence familyHMG high mobility group box;
multimeric complexes3tq6_AB 6erp_ACF 6erp_BGJ 6erq_ACF 6erq_BGJ 6hb4_ADGJ 6hc3_ADGJ 7lbw_AB
reference complex3tq6_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
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# IC=10.245 IC/col=0.569 n_of_columns=18 specificity:   
A |  73  96   9   0   0  73  24  24  24  24  24  24  24  24  96   0  96   7
C |   7   0   7   0   0   7  24  24  24  24  24  24  24  24   0  96   0   9
G |   9   0   7   0  96   9  24  24  24  24  24  24  24  24   0   0   0  73
T |   7   0  73  96   0   7  24  24  24  24  24  24  24  24   0   0   0   7
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updated Mon Dec 18 15:22:41 2023