| structure name | STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6B-DNA) (Int protein) |
| reference | Rubio-Cosials et al. Cell 173 208 2018 |
| source | Enterococcus faecalis |
| experiment | X-ray (resolution=2.67, R-factor=0.188) |
| structural superfamily | DNA breaking-rejoining enzymes; |
| sequence family | Phage integrase family; |
| multimeric complexes | 6emz_AB 6en0_AB 6en1_AB 6en2_AB |
| redundant complexes | 6emz 6en1 6en0 |
| reference complex | 6en1_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NTRKTNRSKYTAVDR |
Estimated binding specificities ?
| contact |  |
A | 4 0 96 96 96 96 4 4 6 24 67 24 7 C | 0 0 0 0 0 0 4 2 14 24 6 24 4 G | 92 96 0 0 0 0 4 4 9 24 9 24 81 T | 0 0 0 0 0 0 84 86 67 24 14 24 4scan! |
Dendrogram of similar interfaces ?
matrix formatNATA------RT----KTTT----NA--RCSAKG--YG--------TA------ATVTDT----------RC---------- L +----------6en2_A +-1 KGTA--NAYASG----ATST----LT------------------------RCST----TTSTRGYC----------TT--QT L +-------2 +----------1z19_B ! ! ----------------AATA--KGNA--IT----------------------TTQAATYGYAKT--------------TT-- L +-3 +-----------5jk0_B ! ! HTTTKGMT--ST----------KATT--QT----QT------------RT--------STRG----EA-------------- L +----4 +-------------------1xo0_B ! ! ------------------------------------------------------IT--------RT------RT-------- L --5 +-------------------4e0p_A ! KATT--AAYT--WTTTKATTQTSTLTLTNT--ST----LTLTRTST----------------------QA----DCKCTC-- L +------------------------2a3v_C |
home
updated Mon Dec 18 14:59:49 2023