| structure name | STRUCTURAL BASIS FOR BROAD DNA-SPECIFICITY IN INTEGRON RECOMBINATION (site-specific recombinase IntI4) |
| reference | MacDonald et al. Nature 440 1157 2006 |
| source | Vibrio cholerae O1 biovar eltor str. N16961 |
| experiment | X-ray (resolution=2.80, R-factor=0.235) |
| structural superfamily | DNA breaking-rejoining enzymes; |
| sequence family | Phage integrase family; |
| multimeric complexes | 2a3v_AB 2a3v_CD |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KTAYWTKTQSLLNSLLIFRSKQDKTI |
Estimated binding specificities ?
| contact |  |
A | 42 0 96 92 7 0 0 C | 18 0 0 1 75 0 96 G | 18 0 0 2 7 96 0 T | 18 96 0 1 7 0 0scan! |
Dendrogram of similar interfaces ?
matrix formatKATTAAYT--WT--TTKATTQTSTLTLTNT--STLTLTITFTRTSTKA------------QA------DCKCTCIC L +-----------2a3v_C +----2 KATANA------AT------LT------------------------KT--------TT--STRGYC---------- L ! +-----------1z1b_B +--3 NATA----RT------KTTT----NA--RCSAKG--------------DT------------RC------------ L ! ! +----------6en2_A +---4 +-----1 ----------------AATA--KGNA--IT--------------------TTQAATYG--YAKT--------TT-- L ! ! +----------5jk0_B --5 ! --------------------------------------------------RTLT----RT---------------- L ! +-------------------4e0p_A ! --------------------------------------------------RTLT----RT------NADAEATT-- L +-----------------------4f43_A |
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updated Tue Dec 19 06:19:08 2023