5a72_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM CA (DNA ENDONUCLEASE I-CVUI)
reference	LopezMendez et al. J.Biol.Chem. 290 28727 2015
source	CHLORELLA VULGARIS
experiment	X-ray (resolution=2.60, R-factor=0.169)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	5a72_AB 5a74_AB 5a77_AB 5a78_AB
reference complex	5a74_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5a72_B interface=20,24,26,28,30,31,38,44,66,68,69,70,72,74,138, nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylnlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs
interface signature	CQVRDYRFRRNDMEK

Estimated binding specificities ?

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# IC=12.652 IC/col=1.054 n_of_columns=12

specificity:

A |   6  75   6   0  82   0   0   0  75   0   0   0
C |   6   6  68   0  14  96   0   0   0  96   0   0
G |  16   6   9  96   0   0  96   0   0   0   0  96
T |  68   9  13   0   0   0   0  96  21   0  96   0

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updated Mon Dec 18 11:50:38 2023