5a77_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH I- CREI TARGET (C1221) IN THE PRESENCE OF 2 MM MG REVEALING DNA CLEAVED
reference	LopezMendez et al. J.Biol.Chem. 290 28727 2015
source	CHLORELLA VULGARIS
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	5a74_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5a77_A interface=24,28,30,31,36,38,44,66,68,69,70,72,74,138, nfhdqlkfawlagfvdadgcinaQivsReDYllkyQvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvv > 5a77_B interface=20,24,26,28,30,31,38,44,66,68,69,70,72,74,138, nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs
interface signature	QRDYQRFRRNDMEK/CQVRDYRFRRNDMEK

Estimated binding specificities ?

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# IC=24.094 IC/col=1.095 n_of_columns=22

specificity:

A |   0  56  96  30  96   2   0   1   0   7   6  86   6   0  93   0   0   0  18   0   0   0
C |  94   7   0   4   0  94   0   0  96   2   7   4  84   0   2  96   0   0   4   0   5   0
G |   0   2   0   4   0   0  96   4   0  81   2   4   2  96   1   0  96   0   2   0   0  96
T |   2  31   0  58   0   0   0  91   0   6  81   2   4   0   0   0   0  96  72  96  91   0

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updated Fri Dec 15 22:36:28 2023