5a74_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM MN
reference	LopezMendez et al. J.Biol.Chem. 290 28727 2015
source	CHLORELLA VULGARIS
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	5a74_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5a74_A interface=20,24,26,28,30,31,38,44,66,68,69,70,72,74,138, nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvv > 5a74_B interface=20,24,26,28,30,31,38,44,66,68,69,70,72,74,138, nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs
interface signature	CQVRDYRFRRNDMEK/CQVRDYRFRRNDMEK

Estimated binding specificities ?

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# IC=26.325 IC/col=1.097 n_of_columns=24

specificity:

A |   7   0  96   0  75  96   0   0   0   0   0  24  24   0   0  96   0   0   0   7   0   0   0  73
C |   7  96   0   0   7   0  96   0   0  96   0  24  24  96   0   0  96   0   0   7  96   0   0   9
G |   7   0   0  96   7   0   0  96   0   0  96  24  24   0  96   0   0  96   0   9   0   0  96   7
T |  75   0   0   0   7   0   0   0  96   0   0  24  24   0   0   0   0   0  96  73   0  96   0   7

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updated Fri Dec 15 22:36:13 2023