interface graph thumbnail
legend  pdf

structure nameHUMAN TDG IN A POST-REACTIVE COMPLEX WITH 5-HYDROXYMETHYLURACIL (5HMU)
(GT mismatch-specific thymine DNA glycosylase)
referenceHashimoto et al. 'Nucleic 40 10203 2012
sourceHomo sapiens
experimentX-ray (resolution=2.49, R-factor=0.226)
structural superfamilyUracil-DNA glycosylase-like;
sequence familyUracil DNA glycosylase superfamily;
multimeric complexes2rba_AB 3ufj_AB 3uo7_AB 3uob_AB
redundant complexes3uo7 3uob 4jgc 2rba 3ufj
reference complex4z47_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --SGKA--AARGACQGPG----                          +-----4fnc_A    
                                              +---1 
  ----------LG--------RG       +--------------2   +-----1mwi_A    
                               !              ! 
  KT----TT--RA----------     --3              +---------4yig_E    
                               ! 
  --------PG--------NG--       +------------------------1oe4_B    
                             

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updated Mon Dec 18 10:23:14 2023