3ufj_AB : 3D-footprint complex

structure name	HUMAN THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE ANALOG 2'-FLUORO-2'- DEOXYURIDINE
reference	Pozharski et al. Proc.Natl.Acad.Sci.USA 109 8091 2012
source	Homo sapiens
experiment	X-ray (resolution=2.97, R-factor=?)
structural superfamily	Uracil-DNA glycosylase-like;
reference complex	4z47_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3ufj_A interface=81,114,155,156,158,161, ltktlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSkdlsskefreggrilvqklqkyqpriavfngkCiyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAqfPraqdkvhyyiklkdlrdqlkgier > 3ufj_B interface=111,152,153,155,158, tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkCiyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAqfPraqdkvhyyiklkdlrdqlkgier
interface signature	SCARAP/CARAP

Estimated binding specificities ?

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# IC=14.060 IC/col=0.414 n_of_columns=34

specificity:

A |   2   2  24  24   0   2  24  24   2   2  69  24  24  24  24  24  24  24  24  24   4  24  24  24  96   2   7  24   4  96  24  24  24   4
C |   4   2  24  24   2   2  24  24   4  91   9  24  24  24  24  24  24  24  24  24   2  24  24  24   0   2  12  24  86   0  24  24  24  88
G |  88   0  24  24  94   4  24  24  88   1   9  24  24  24  24  24  24  24  24  24  88  24  24  24   0  88   4  24   4   0  24  24  24   2
T |   2  92  24  24   0  88  24  24   2   2   9  24  24  24  24  24  24  24  24  24   2  24  24  24   0   4  73  24   2   0  24  24  24   2

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updated Fri Dec 15 17:09:35 2023