interface graph thumbnail
legend  pdf

structure nameVACCINIA VIRUS D4/A20(1-50) IN COMPLEX WITH DSDNA CONTAINING AN ABASIC SITE AND FREE URACYL
(URACIL-DNA GLYCOSYLASE)
referenceburmeister et al. J.Biol.Chem. 290 17923 2015
sourceVACCINIA VIRUS (STRAIN COPENHAGEN) / VACCINIA VIRUS (STRAIN COPENHAGEN)
experimentX-ray (resolution=2.70, R-factor=0.182)
structural superfamilyUracil-DNA glycosylase-like;
sequence familyUracil DNA glycosylase superfamily;
multimeric complexes4qcb_AB 8hg1_BC
redundant complexes4qcb
reference complex8hg1_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  KT----TT--RA------                             +--4yig_E    
                               +-----------------2 
  ----------PALA----           !                 ! +4uqm_A    
                           +---3                 +-1 
  --------PT--------       !   !                   +1emh_A    
                         --4   ! 
  ----RA--------NTRC       !   +--------------------2dp6_A    
                           ! 
  VGRG----PG--------       +------------------------1oe4_B    
                         

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updated Mon Dec 18 11:38:32 2023