interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ADDAB-DNA COMPLEX AT 2.8 ANGSTROMS
(ATP-DEPENDENT HELICASENUCLEASE SUBUNIT A)
referenceSaikrishnan et al. 'Embo 31 1568 2012
sourceBACILLUS SUBTILIS
experimentX-ray (resolution=2.80, R-factor=0.236)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;Restriction endonuclease-like;
sequence familyUvrD/REP helicase;
multimeric complexes3u44_AB 3u4q_AB 4ceh_AB 4cei_AB 4cej_AB
redundant complexes4cei_A 3u44 4ceh 4cej
links to other resourcesNAKB PDBSum PDIdb DNAproDB

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  FT------------LTFG----WT--RTRT----HTST----RT----       +-----------------------------6ppu_B    
                                                         ! 
  --HTDTKTRTATFTLTFT----WTRT--RT----HT------------   L   !                    +--------1uaa_B    
                                                       --6                    ! 
  --HT------------FT----FTRT--RTNTATHT--ET------ET       !          +---------4         +4c2u_D    
                                                         !          !         !       +-1 
  --HT------------FT----WTRT--RT----HT----ET------       !          !         +-------2 +3pjr_A    
                                                         +----------5                 ! 
  FTHT------------FT----FTRT--RT--ACHT--ET--------                  !                 +4c2t_B    
                                                                    ! 
  FTHT------------FT----WGRT--RT----HG----RT--EGEG                  !            +-----2is6_B    
                                                                    +------------3 
  FTHT------------FTDTYTWTRT--RT------------------   L                           +-----2pjr_A    
                                                       

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updated Tue Dec 19 08:14:38 2023