| structure name | CRYSTAL STRUCTURE OF ADPNP-BOUND ADDAB WITH A FORKED DNA SUBSTRATE (ATP-DEPENDENT HELICASENUCLEASE SUBUNIT A) |
| reference | Krajewski et al. Nature 508 416 2014 |
| source | BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 |
| experiment | X-ray (resolution=2.80, R-factor=0.198) |
| structural superfamily | P-loop containing nucleoside triphosphate hydrolases;Restriction endonuclease-like; |
| sequence family | UvrD/REP helicase; |
| multimeric complexes | 3u44_AB 3u4q_AB 4ceh_AB 4cei_AB 4cej_AB |
| redundant complexes | 4ceh 3u44 4cej 3u4q |
| reference complex | 3u4q_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | HIDQERFFRRHND |
Estimated binding specificities ?
| contact |  |
A | 0 13 24 24 24 24 24 24 24 13 0 24 24 24 24 24 24 24 24 24 24 24 0 0 0 0 0 C | 0 54 24 24 24 24 24 24 24 54 0 24 24 24 24 24 24 24 24 24 24 24 0 0 0 0 0 G | 96 13 24 24 24 24 24 24 24 13 0 24 24 24 24 24 24 24 24 24 24 24 0 0 96 0 0 T | 0 16 24 24 24 24 24 24 24 16 96 24 24 24 24 24 24 24 24 24 24 24 96 96 0 96 96scan! |
Dendrogram of similar interfaces ?
matrix formatFG--RTHG----------LT--FT----------WTRGRT----HTST-------- L +------------------------6ppr_B ! ------HT--------------FT----------FTRTRTNTATHT--ET----ET ! +4c2u_D ! +-1 ------HT--------------FT----------WTRTRT----HT----ET---- +--7 +-------2 +3pjr_A ! ! ! ! FT----HT--------------FT----------FTRTRT--ACHT--ET------ ! ! +---------4 +4c2t_B ! ! ! ! ------HTDTKTRTATFTLT--FT----------WTRTRT----HT---------- L ! +-----6 +--------1uaa_B --8 ! FT----HT------------STFT----------WGRTRT----HG----RTEGEG ! ! +-----2is6_B ! +------------3 FTTT--HT--------------FTDT----YT--WTRTRT---------------- L ! +-----2pjr_A ! --------------------------DTVT--PT----FT----HT---------- L ! +------------------3upu_A +--------5 --------------------------------VT------RT--HT---------- L +------------------7otj_B |
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updated Mon Dec 18 09:54:03 2023