3mip_B : 3D-footprint complex

structure name	I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-8GCG) (MSO-8G)
reference	Stoddard et al. 'Nucleic 38 5601 2010
source	SYNTHETIC CONSTRUCT
experiment	X-ray (resolution=2.40, R-factor=0.232)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	1m5x_AB 2fld_AB 3ko2_AB 3ko2_FG 3mip_AB 3mis_AB
reference complex	2fld_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3mip_B interface=19,21,23,25,27,29,30,36,38,44,67,70,72,74,78,80, tlqpteaayiagfldgdgSiYaRlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgilRkdRgDgIadyRiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki
interface signature	SYRERDYQRIRRDIRY

Estimated binding specificities ?

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# IC=10.266 IC/col=1.027 n_of_columns=10

specificity:

A |   6   6  89   0   0   0   0   9   0   9
C |   6   6   0   0  96   0   0   6  96   6
G |  78  75   0  96   0  96  96   6   0   6
T |   6   9   7   0   0   0   0  75   0  75

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updated Mon Dec 18 08:32:10 2023