3ko2_FG : 3D-footprint complex

structure name	I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-7C)
reference	Stoddard et al. 'Nucleic 38 5601 2010
source	Monomastix sp.
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2fld_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3ko2_F interface=19,21,23,27,29,30,44,67,70,72,74,80, tlqpteaayiagfldgdgSiYaRlipRpDYkdikyqvelaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiWgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki > 3ko2_G interface=19,21,23,25,27,29,38,44,67,70,72,74,80, tlqpteaayiagfldgdgSiYaRlIpRpDykdikyqvElaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiWgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki
interface signature	SYRRDYIRRDIW/SYRIRDEIRRDIW

Estimated binding specificities ?

readout + contact

# IC=22.237 IC/col=1.059 n_of_columns=21

specificity:

A |   7   0   0  96   7   0   0   0   0   7  24  24  96   0  96   0  96   9   0   0   0
C |   9  96   0   0  73  96   0   0  96   9  24  24   0   0   0  96   0   7   0   0  96
G |  73   0  96   0   9   0  96   0   0  73  24  24   0  96   0   0   0  73   0   0   0
T |   7   0   0   0   7   0   0  96   0   7  24  24   0   0   0   0   0   7  96  96   0

scan!

home
updated Fri Dec 15 15:21:18 2023