2fld_AB : 3D-footprint complex

structure name	I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY
reference	Havranek et al. Nature 441 656 2006
source	Monomastix sp.
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2fld_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2fld_A interface=19,21,23,27,29,30,36,44,65,67,70,72,74,76,78, tlqpteaayiagfldgdgSiYaLlipRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki > 2fld_B interface=19,21,23,25,27,29,30,36,44,65,67,70,72,74,76,78, tlqpteaayiagfldgdgSiYaLlIpRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkies
interface signature	SYLRDYQINRRDIDR/SYLIRDYQINRRDIDR

Estimated binding specificities ?

readout + contact

# IC=20.345 IC/col=0.925 n_of_columns=22

specificity:

A |   0  96   0   5  82   0   0   0   0   4  24  24  77   0  96   0   0   9  24  24  18   4
C |  96   0   0   0   6   0   0   0  96   4  24  24   4   0   0  96  96   9  24  24  78  84
G |   0   0  96   0   4  96  96   0   0  82  24  24   6  96   0   0   0  73  24  24   0   4
T |   0   0   0  91   4   0   0  96   0   6  24  24   9   0   0   0   0   5  24  24   0   4

scan!

home
updated Fri Dec 15 11:54:24 2023