Estimated binding specificities ?

structure nameCRYSTAL STRUCTURE OF THE IS608 TRANSPOSASE IN COMPLEX WITH THE COMPLETE RIGHT END 35-MER DNA AND MANGANESE
(TRANSPOSASE ORFA)
referenceRonning et al. 'Cell(Cambridge,Mass.)' 132 208 2008
sourceHELICOBACTER PYLORI
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilyTransposase IS200-like;
sequence familyTransposase IS200 like;
multimeric complexes2a6o_AB 2vhg_AB 2vic_AB 2vih_AB 2vju_AB
reference complex2vih_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
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# IC=8.004 IC/col=0.243 n_of_columns=33 specificity:   
A |  96  24  24  24  24  24  24  24   9   9  24   0  24  24   9   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96  96
C |   0  24  24  24  24  24  24  24   9  67  24   0  24  24  11  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0
G |   0  24  24  24  24  24  24  24  69  11  24   0  24  24  67   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0
T |   0  24  24  24  24  24  24  24   9   9  24  96  24  24   9   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0
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updated Mon Dec 18 07:17:27 2023