2vic_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ISHP608 TRANSPOSASE IN COMPLEX WITH LEFT END 26- MER DNA AND MANGANESE
reference	Ronning et al. 'Cell(Cambridge,Mass.)' 132 208 2008
source	HELICOBACTER PYLORI
experiment	X-ray (resolution=2.35, R-factor=?)
structural superfamily	Transposase IS200-like;
reference complex	2vih_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2vic_A interface= vlyksnhnvvysckyhivwcpkyrrkvlvgavemrlkeiiqevakelrveiiemqtdkdhihiladidpsfgvmkfiktakgrssrilrqefnhlktklptlwtnscfistvggaplnvvkqyienqqnsnrpkqkekwksyvdnlqtkal > 2vic_B interface= vlyksnhnvvysckyhivwcpkyrrkvlvgavemrlkeiiqevakelrveiiemqtdkdhihiladidpsfgvmkfiktakgrssrilrqefnhlktklptlwtnscfistvggaplnvvkqyienqq
interface signature	/

Estimated binding specificities ?

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# IC=7.099 IC/col=0.323 n_of_columns=22

specificity:

A |  96   0  24  24  24  24  24  24  24  24  24   0  24  24  24  24  24  24  54   0   0  13
C |   0   0  24  24  24  24  24  24  24  24  24   0  24  24  24  24  24  24  13   0   0  16
G |   0  96  24  24  24  24  24  24  24  24  24   0  24  24  24  24  24  24  16   0  96  54
T |   0   0  24  24  24  24  24  24  24  24  24  96  24  24  24  24  24  24  13  96   0  13

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updated Fri Dec 15 12:56:22 2023